Carnation DB

Dca52428.1

Annotation

7-exons
f-1
sp|Q9AW99_9ASTR#GTP binding protein#Cichorium intybus x Cichorium endivia#Name=chi3154#GO:0005525;GO:0015031;GO:0007264#1F2P0C
Repeat List (scaffold6902)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52428.1	1	200	200	91	200	91	7e-107
Target_name	Start	End	Length	Cov(%)
sp\|Q9AW99_9ASTR	1	200	200	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52428.1	1	200	200	82	200	82	4e-94
Target_name	Start	End	Length	Cov(%)
AT4G19640.1	1	200	200	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6902	Augus-PASA	mRNA	12227	16632	.	-	.	ID=Dca52428.1;Parent=Dca52428
scaffold6902	Augus-PASA	exon	12227	12327	.	-	.	ID=Dca52428.1.exon1;Parent=Dca52428.1
scaffold6902	Augus-PASA	exon	13353	13446	.	-	.	ID=Dca52428.1.exon2;Parent=Dca52428.1
scaffold6902	Augus-PASA	exon	13811	13884	.	-	.	ID=Dca52428.1.exon3;Parent=Dca52428.1
scaffold6902	Augus-PASA	exon	14040	14088	.	-	.	ID=Dca52428.1.exon4;Parent=Dca52428.1
scaffold6902	Augus-PASA	exon	16139	16306	.	-	.	ID=Dca52428.1.exon5;Parent=Dca52428.1
scaffold6902	Augus-PASA	exon	16400	16477	.	-	.	ID=Dca52428.1.exon6;Parent=Dca52428.1
scaffold6902	Augus-PASA	exon	16594	16632	.	-	.	ID=Dca52428.1.exon7;Parent=Dca52428.1