Carnation DB

Dca52486.1

Annotation

6-exons
f-1
sp|C6TGF7_SOYBN#Putative uncharacterized protein#Glycine max (Soybean) (Glycine hispida)#unknown#unknown#0F0P0C
sp|F8RP38_PEA#Zinc finger protein LSD1#Pisum sativum (Garden pea)#unknown#unknown#0F0P0C
Repeat List (scaffold692)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52486.1	1	177	177	65.53	177	65	5e-58
Target_name	Start	End	Length	Cov(%)
sp\|C6TGF7_SOYBN	1	177	177	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52486.1	1	177	177	59.32	177	58	1e-45
Target_name	Start	End	Length	Cov(%)
Os12t0611000-01	1	171	173	98.84

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold692	Augustus	mRNA	37871	43694	.	+	.	ID=Dca52486.1;Parent=Dca52486
scaffold692	Augustus	exon	37871	37982	.	+	.	ID=Dca52486.1.exon1;Parent=Dca52486.1
scaffold692	Augustus	exon	38700	38825	.	+	.	ID=Dca52486.1.exon2;Parent=Dca52486.1
scaffold692	Augustus	exon	41907	42019	.	+	.	ID=Dca52486.1.exon3;Parent=Dca52486.1
scaffold692	Augustus	exon	43087	43155	.	+	.	ID=Dca52486.1.exon4;Parent=Dca52486.1
scaffold692	Augustus	exon	43491	43562	.	+	.	ID=Dca52486.1.exon5;Parent=Dca52486.1
scaffold692	Augustus	exon	43653	43694	.	+	.	ID=Dca52486.1.exon6;Parent=Dca52486.1