Carnation DB

Dca52488.1

Annotation

10-exons
f-1
sp|B9HUX2_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_567716#unknown#0F0P0C
AT3G52190.1 | Symbols: PHF1 | phosphate transporter traffic facilitator1 | chr3:19354117-19356910 REVERSE LENGTH=398
Repeat List (scaffold692)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52488.1	1	380	380	62.63	380	62	3e-137
Target_name	Start	End	Length	Cov(%)
sp\|B9HUX2_POPTR	1	385	385	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52488.1	3	366	380	55.78	364	57	8e-119
Target_name	Start	End	Length	Cov(%)
AT3G52190.1	11	382	398	93.46

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold692	Augus-PASA	mRNA	63032	68292	.	+	.	ID=Dca52488.1;Parent=Dca52488
scaffold692	Augus-PASA	exon	63032	63178	.	+	.	ID=Dca52488.1.exon1;Parent=Dca52488.1
scaffold692	Augus-PASA	exon	63273	63367	.	+	.	ID=Dca52488.1.exon2;Parent=Dca52488.1
scaffold692	Augus-PASA	exon	64003	64135	.	+	.	ID=Dca52488.1.exon3;Parent=Dca52488.1
scaffold692	Augus-PASA	exon	64570	64661	.	+	.	ID=Dca52488.1.exon4;Parent=Dca52488.1
scaffold692	Augus-PASA	exon	65293	65392	.	+	.	ID=Dca52488.1.exon5;Parent=Dca52488.1
scaffold692	Augus-PASA	exon	65480	65552	.	+	.	ID=Dca52488.1.exon6;Parent=Dca52488.1
scaffold692	Augus-PASA	exon	65645	65768	.	+	.	ID=Dca52488.1.exon7;Parent=Dca52488.1
scaffold692	Augus-PASA	exon	67490	67609	.	+	.	ID=Dca52488.1.exon8;Parent=Dca52488.1
scaffold692	Augus-PASA	exon	67923	67993	.	+	.	ID=Dca52488.1.exon9;Parent=Dca52488.1
scaffold692	Augus-PASA	exon	68105	68292	.	+	.	ID=Dca52488.1.exon10;Parent=Dca52488.1