Carnation DB

Dca5253.1

Annotation

5-exons
f-1
sp|B9T7Z8_RICCO#Alcohol dehydrogenase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0164610#GO:0046029;GO:0000166;GO:0008270#3F0P0C
Repeat List (scaffold12)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5253.1	1	358	360	76.38	358	77	8e-163
Target_name	Start	End	Length	Cov(%)
sp\|B9T7Z8_RICCO	2	359	362	98.89

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5253.1	11	358	360	69.44	348	72	5e-139
Target_name	Start	End	Length	Cov(%)
AT4G37990.1	7	354	359	96.93

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold12	Augus-PASA	mRNA	578081	580765	.	-	.	ID=Dca5253.1;Parent=Dca5253
scaffold12	Augus-PASA	exon	578081	578283	.	-	.	ID=Dca5253.1.exon1;Parent=Dca5253.1
scaffold12	Augus-PASA	exon	578378	578531	.	-	.	ID=Dca5253.1.exon2;Parent=Dca5253.1
scaffold12	Augus-PASA	exon	578710	579223	.	-	.	ID=Dca5253.1.exon3;Parent=Dca5253.1
scaffold12	Augus-PASA	exon	579647	579760	.	-	.	ID=Dca5253.1.exon4;Parent=Dca5253.1
scaffold12	Augus-PASA	exon	580668	580765	.	-	.	ID=Dca5253.1.exon5;Parent=Dca5253.1