Dca52560.1
Annotation
- 3-exons
- f-1
- sp|F4NCI7_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- sp|Q8S6P1_ORYSJ#Putative reverse transcriptase#Oryza sativa subsp japonica (Rice)#Name=OSJNBa0073L01.7#GO:0003723;GO:0003964;GO:0008270;GO:0006278#3F1P0C
- Repeat List (scaffold6940)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca52560.1 |
190 |
393 |
395 |
25.31 |
204 |
48 |
9e-43
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F4NCI7_BETVU |
524 |
730 |
1362 |
15.19 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca52560.1 |
190 |
395 |
395 |
15.94 |
206 |
31 |
5e-22
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
441 |
648 |
857 |
24.27 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold6940 |
Augustus |
mRNA |
4859 |
7480 |
. |
+ |
. |
ID=Dca52560.1;Parent=Dca52560 |
| scaffold6940 |
Augustus |
exon |
4859 |
5029 |
. |
+ |
. |
ID=Dca52560.1.exon1;Parent=Dca52560.1 |
| scaffold6940 |
Augustus |
exon |
5775 |
6167 |
. |
+ |
. |
ID=Dca52560.1.exon2;Parent=Dca52560.1 |
| scaffold6940 |
Augustus |
exon |
6857 |
7480 |
. |
+ |
. |
ID=Dca52560.1.exon3;Parent=Dca52560.1 |
