Dca52652.1
Annotation
- 4-exons
- f-1
- sp|O23588_ARATH#Retrotransposon like protein#Arabidopsis thaliana (Mouse-ear cress)#Name=dl4760c#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold697)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca52652.1 |
98 |
381 |
381 |
30.97 |
284 |
37 |
8e-49
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O23588_ARATH |
761 |
1076 |
1433 |
22.05 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca52652.1 |
261 |
381 |
381 |
17.32 |
121 |
52 |
2e-31
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G23160.1 |
120 |
245 |
1262 |
9.98 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold697 |
Augustus |
mRNA |
99288 |
102195 |
. |
- |
. |
ID=Dca52652.1;Parent=Dca52652 |
| scaffold697 |
Augustus |
exon |
99288 |
99680 |
. |
- |
. |
ID=Dca52652.1.exon1;Parent=Dca52652.1 |
| scaffold697 |
Augustus |
exon |
99922 |
100384 |
. |
- |
. |
ID=Dca52652.1.exon2;Parent=Dca52652.1 |
| scaffold697 |
Augustus |
exon |
101816 |
101963 |
. |
- |
. |
ID=Dca52652.1.exon3;Parent=Dca52652.1 |
| scaffold697 |
Augustus |
exon |
102054 |
102195 |
. |
- |
. |
ID=Dca52652.1.exon4;Parent=Dca52652.1 |
