Carnation DB

Dca52680.1

Annotation

5-exons
f-1
sp|C0J9Y3_ORYNI#Copine-1#Oryza nivara (Indian wild rice)#unknown#GO:0008270#1F0P0C
Repeat List (scaffold6979)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52680.1	26	127	135	56.29	102	75	2e-40
Target_name	Start	End	Length	Cov(%)
sp\|C0J9Y3_ORYNI	58	158	447	22.59

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52680.1	26	127	135	56.29	102	75	2e-41
Target_name	Start	End	Length	Cov(%)
Os06t0608800-04	58	158	448	22.54

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6979	Augustus	mRNA	20801	22483	.	+	.	ID=Dca52680.1;Parent=Dca52680
scaffold6979	Augustus	exon	20801	20880	.	+	.	ID=Dca52680.1.exon1;Parent=Dca52680.1
scaffold6979	Augustus	exon	21899	21953	.	+	.	ID=Dca52680.1.exon2;Parent=Dca52680.1
scaffold6979	Augustus	exon	22048	22132	.	+	.	ID=Dca52680.1.exon3;Parent=Dca52680.1
scaffold6979	Augustus	exon	22218	22358	.	+	.	ID=Dca52680.1.exon4;Parent=Dca52680.1
scaffold6979	Augustus	exon	22437	22483	.	+	.	ID=Dca52680.1.exon5;Parent=Dca52680.1