Dca52715.1
Annotation
- 3-exons
- f-1
- sp|O22148_ARATH#Putative non-LTR retroelement reverse transcriptase#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g45230#GO:0004523;GO:0003723;GO:0003964;GO:0006278#3F1P0C
- Repeat List (scaffold699)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca52715.1 |
1 |
175 |
178 |
47.75 |
175 |
42 |
2e-35
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O22148_ARATH |
521 |
723 |
1374 |
14.77 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca52715.1 |
1 |
176 |
178 |
35.39 |
176 |
31 |
1e-22
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
441 |
643 |
857 |
23.68 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold699 |
Augustus |
mRNA |
27116 |
28325 |
. |
- |
. |
ID=Dca52715.1;Parent=Dca52715 |
| scaffold699 |
Augustus |
exon |
27116 |
27399 |
. |
- |
. |
ID=Dca52715.1.exon1;Parent=Dca52715.1 |
| scaffold699 |
Augustus |
exon |
27705 |
27812 |
. |
- |
. |
ID=Dca52715.1.exon2;Parent=Dca52715.1 |
| scaffold699 |
Augustus |
exon |
27899 |
28325 |
. |
- |
. |
ID=Dca52715.1.exon3;Parent=Dca52715.1 |
