Carnation DB

Dca52719.1

Annotation

8-exons
f-1
sp|B9H6Y9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_716442#GO:0016020;GO:0015297;GO:0015238#2F0P1C
AT5G65380.1 | Symbols: | MATE efflux family protein | chr5:26123241-26126352 REVERSE LENGTH=486
Repeat List (scaffold699)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52719.1	1	478	496	58.26	478	61	2e-163
Target_name	Start	End	Length	Cov(%)
sp\|B9H6Y9_POPTR	1	475	475	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52719.1	20	484	496	45.76	465	48	1e-125
Target_name	Start	End	Length	Cov(%)
AT5G65380.1	4	477	486	97.53

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold699	Augustus	mRNA	71182	74123	.	+	.	ID=Dca52719.1;Parent=Dca52719
scaffold699	Augustus	exon	71182	71481	.	+	.	ID=Dca52719.1.exon1;Parent=Dca52719.1
scaffold699	Augustus	exon	72126	72667	.	+	.	ID=Dca52719.1.exon2;Parent=Dca52719.1
scaffold699	Augustus	exon	72898	72984	.	+	.	ID=Dca52719.1.exon3;Parent=Dca52719.1
scaffold699	Augustus	exon	73077	73133	.	+	.	ID=Dca52719.1.exon4;Parent=Dca52719.1
scaffold699	Augustus	exon	73236	73474	.	+	.	ID=Dca52719.1.exon5;Parent=Dca52719.1
scaffold699	Augustus	exon	73635	73753	.	+	.	ID=Dca52719.1.exon6;Parent=Dca52719.1
scaffold699	Augustus	exon	73876	73962	.	+	.	ID=Dca52719.1.exon7;Parent=Dca52719.1
scaffold699	Augustus	exon	74064	74123	.	+	.	ID=Dca52719.1.exon8;Parent=Dca52719.1