Carnation DB

Dca52751.1

Annotation

6-exons
f-1
sp|B9HDV6_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_561021#GO:0016602;GO:0003677;GO:0003700#2F0P1C
sp|B9RK30_RICCO#Nuclear transcription factor Y subunit A-3, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1046050#GO:0016602;GO:0003677;GO:0003700#2F0P1C
Repeat List (scaffold6995)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52751.1	29	229	241	44.39	201	48	3e-47
Target_name	Start	End	Length	Cov(%)
sp\|B9HDV6_POPTR	37	258	341	65.1

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52751.1	50	213	241	30.7	164	42	3e-33
Target_name	Start	End	Length	Cov(%)
Os07t0608200-01	31	209	305	58.68

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6995	Augustus	mRNA	6480	7866	.	-	.	ID=Dca52751.1;Parent=Dca52751
scaffold6995	Augustus	exon	6480	6641	.	-	.	ID=Dca52751.1.exon1;Parent=Dca52751.1
scaffold6995	Augustus	exon	6738	6893	.	-	.	ID=Dca52751.1.exon2;Parent=Dca52751.1
scaffold6995	Augustus	exon	6990	7052	.	-	.	ID=Dca52751.1.exon3;Parent=Dca52751.1
scaffold6995	Augustus	exon	7134	7228	.	-	.	ID=Dca52751.1.exon4;Parent=Dca52751.1
scaffold6995	Augustus	exon	7356	7546	.	-	.	ID=Dca52751.1.exon5;Parent=Dca52751.1
scaffold6995	Augustus	exon	7808	7866	.	-	.	ID=Dca52751.1.exon6;Parent=Dca52751.1