Carnation DB

Dca52798.1

Annotation

7-exons
f-1
sp|A9PJ39_9ROSI#Putative uncharacterized protein#Populus trichocarpa x Populus deltoides#unknown#unknown#0F0P0C
AT5G51220.1 | Symbols: | ubiquinol-cytochrome C chaperone family protein | chr5:20821405-20823125 REVERSE LENGTH=281
Repeat List (scaffold7)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52798.1	58	281	288	63.54	224	82	3e-107
Target_name	Start	End	Length	Cov(%)
sp\|A9PJ39_9ROSI	61	284	291	76.97

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52798.1	1	281	288	63.19	281	65	9e-101
Target_name	Start	End	Length	Cov(%)
AT5G51220.1	1	278	281	98.93

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold7	Augus-PASA	mRNA	268225	271547	.	-	.	ID=Dca52798.1;Parent=Dca52798
scaffold7	Augus-PASA	exon	268225	268298	.	-	.	ID=Dca52798.1.exon1;Parent=Dca52798.1
scaffold7	Augus-PASA	exon	268546	268594	.	-	.	ID=Dca52798.1.exon2;Parent=Dca52798.1
scaffold7	Augus-PASA	exon	268802	268862	.	-	.	ID=Dca52798.1.exon3;Parent=Dca52798.1
scaffold7	Augus-PASA	exon	268959	269083	.	-	.	ID=Dca52798.1.exon4;Parent=Dca52798.1
scaffold7	Augus-PASA	exon	269256	269422	.	-	.	ID=Dca52798.1.exon5;Parent=Dca52798.1
scaffold7	Augus-PASA	exon	269899	270112	.	-	.	ID=Dca52798.1.exon6;Parent=Dca52798.1
scaffold7	Augustus	exon	271371	271547	.	-	.	ID=Dca52798.1.exon7;Parent=Dca52798.1