Carnation DB

Dca52812.1

Annotation

5-exons
f-1
sp|B9STI8_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_0491950#unknown#0F0P0C
Os03t0149200-01 HR-like lesion-inducer family protein.
Repeat List (scaffold7)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52812.1	1	156	157	78.34	156	79	1e-67
Target_name	Start	End	Length	Cov(%)
sp\|B9STI8_RICCO	1	156	157	99.36

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52812.1	1	157	157	70.7	157	71	7e-58
Target_name	Start	End	Length	Cov(%)
Os03t0149200-01	1	157	158	99.36

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold7	Augus-PASA	mRNA	400283	401793	.	+	.	ID=Dca52812.1;Parent=Dca52812
scaffold7	Augus-PASA	exon	400283	400350	.	+	.	ID=Dca52812.1.exon1;Parent=Dca52812.1
scaffold7	Augus-PASA	exon	401078	401192	.	+	.	ID=Dca52812.1.exon2;Parent=Dca52812.1
scaffold7	Augus-PASA	exon	401303	401392	.	+	.	ID=Dca52812.1.exon3;Parent=Dca52812.1
scaffold7	Augus-PASA	exon	401504	401602	.	+	.	ID=Dca52812.1.exon4;Parent=Dca52812.1
scaffold7	Augus-PASA	exon	401692	401793	.	+	.	ID=Dca52812.1.exon5;Parent=Dca52812.1