Carnation DB

Dca52853.1

Annotation

5-exons
f-1
sp|B4FFD7_MAIZE#Putative uncharacterized protein#Zea mays (Maize)#unknown#unknown#0F0P0C
Os04t0102600-01 Similar to Splicing factor 3B subunit 2 (Spliceosome associated protein 145) (SAP 145) (SF3b150) (Pre-mRNA splicing factor SF3b 145 kDa subunit).
Repeat List (scaffold7)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52853.1	1	188	199	48.24	188	51	8e-46
Target_name	Start	End	Length	Cov(%)
sp\|B4FFD7_MAIZE	23	202	206	87.37

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52853.1	3	188	199	46.23	186	49	1e-43
Target_name	Start	End	Length	Cov(%)
Os04t0102600-01	25	202	207	85.99

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold7	Augustus	mRNA	608637	609873	.	+	.	ID=Dca52853.1;Parent=Dca52853
scaffold7	Augustus	exon	608637	608642	.	+	.	ID=Dca52853.1.exon1;Parent=Dca52853.1
scaffold7	Augustus	exon	608991	609160	.	+	.	ID=Dca52853.1.exon2;Parent=Dca52853.1
scaffold7	Augustus	exon	609260	609473	.	+	.	ID=Dca52853.1.exon3;Parent=Dca52853.1
scaffold7	Augustus	exon	609572	609678	.	+	.	ID=Dca52853.1.exon4;Parent=Dca52853.1
scaffold7	Augustus	exon	609771	609873	.	+	.	ID=Dca52853.1.exon5;Parent=Dca52853.1