Carnation DB

Dca52867.1

Annotation

6-exons
f-1
sp|A5BCC7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_040650#GO:0003676;GO:0008270;GO:0015074#2F1P0C
Os11t0656500-01 Integrase, catalytic core domain containing protein.
Repeat List (scaffold7)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52867.1	87	1247	1610	35.03	1161	49	0
Target_name	Start	End	Length	Cov(%)
sp\|A5BCC7_VITVI	9	1138	1316	85.86

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52867.1	336	1247	1610	18.13	912	32	3e-126
Target_name	Start	End	Length	Cov(%)
Os11t0656500-01	379	1221	1401	60.17

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold7	Augustus	mRNA	691105	704956	.	-	.	ID=Dca52867.1;Parent=Dca52867
scaffold7	Augustus	exon	691105	691139	.	-	.	ID=Dca52867.1.exon1;Parent=Dca52867.1
scaffold7	Augustus	exon	691222	691600	.	-	.	ID=Dca52867.1.exon2;Parent=Dca52867.1
scaffold7	Augustus	exon	692280	692755	.	-	.	ID=Dca52867.1.exon3;Parent=Dca52867.1
scaffold7	Augustus	exon	694869	695076	.	-	.	ID=Dca52867.1.exon4;Parent=Dca52867.1
scaffold7	Augustus	exon	701105	704582	.	-	.	ID=Dca52867.1.exon5;Parent=Dca52867.1
scaffold7	Augustus	exon	704700	704956	.	-	.	ID=Dca52867.1.exon6;Parent=Dca52867.1