Carnation DB

Dca52906.1

Annotation

6-exons
f-1
sp|A3ASZ0_ORYSJ#Putative uncharacterized protein#Oryza sativa subsp japonica (Rice)#ORFNames=OsJ_14480#GO:0016020;GO:0015297;GO:0015238#2F0P1C
AT3G23560.1 | Symbols: ALF5 | MATE efflux family protein | chr3:8454361-8456588 REVERSE LENGTH=477
Repeat List (scaffold70)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52906.1	2	282	290	37.58	281	34	5e-49
Target_name	Start	End	Length	Cov(%)
sp\|A3ASZ0_ORYSJ	42	370	462	71.21

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52906.1	1	143	290	25.51	143	52	5e-40
Target_name	Start	End	Length	Cov(%)
AT3G23560.1	48	186	477	29.14

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold70	Augustus	mRNA	200378	203776	.	-	.	ID=Dca52906.1;Parent=Dca52906
scaffold70	Augustus	exon	200378	200642	.	-	.	ID=Dca52906.1.exon1;Parent=Dca52906.1
scaffold70	Augustus	exon	200739	200795	.	-	.	ID=Dca52906.1.exon2;Parent=Dca52906.1
scaffold70	Augustus	exon	200948	201034	.	-	.	ID=Dca52906.1.exon3;Parent=Dca52906.1
scaffold70	Augustus	exon	201189	201285	.	-	.	ID=Dca52906.1.exon4;Parent=Dca52906.1
scaffold70	Augustus	exon	201511	201736	.	-	.	ID=Dca52906.1.exon5;Parent=Dca52906.1
scaffold70	Augustus	exon	203636	203776	.	-	.	ID=Dca52906.1.exon6;Parent=Dca52906.1