Dca52933.1
Annotation
- 3-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold7001)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca52933.1 |
2 |
713 |
718 |
58.35 |
712 |
52 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
188 |
961 |
964 |
80.29 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca52933.1 |
2 |
702 |
718 |
35.79 |
701 |
32 |
4e-98
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
585 |
1383 |
1401 |
57.03 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold7001 |
Augustus |
mRNA |
2 |
2641 |
. |
+ |
. |
ID=Dca52933.1;Parent=Dca52933 |
| scaffold7001 |
Augustus |
exon |
2 |
318 |
. |
+ |
. |
ID=Dca52933.1.exon1;Parent=Dca52933.1 |
| scaffold7001 |
Augustus |
exon |
436 |
1295 |
. |
+ |
. |
ID=Dca52933.1.exon2;Parent=Dca52933.1 |
| scaffold7001 |
Augustus |
exon |
1662 |
2641 |
. |
+ |
. |
ID=Dca52933.1.exon3;Parent=Dca52933.1 |
