Carnation DB

Dca52947.1

Annotation

5-exons
f-166
sp|Q0ZCD0_POPTR#Integrase#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0006278#3F1P0C
Repeat List (scaffold7008)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52947.1	124	297	754	16.04	174	70	1e-64
Target_name	Start	End	Length	Cov(%)
sp\|Q0ZCD0_POPTR	634	807	1139	15.27

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52947.1	127	257	754	6.36	131	37	6e-14
Target_name	Start	End	Length	Cov(%)
Os04t0191000-01	877	1003	1539	8.25

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold7008	Augustus	mRNA	11523	15323	.	-	.	ID=Dca52947.1;Parent=Dca52947
scaffold7008	Augustus	exon	11523	11750	.	-	.	ID=Dca52947.1.exon1;Parent=Dca52947.1
scaffold7008	Augustus	exon	11805	12884	.	-	.	ID=Dca52947.1.exon2;Parent=Dca52947.1
scaffold7008	Augustus	exon	13559	14143	.	-	.	ID=Dca52947.1.exon3;Parent=Dca52947.1
scaffold7008	Augustus	exon	14898	15104	.	-	.	ID=Dca52947.1.exon4;Parent=Dca52947.1
scaffold7008	Augustus	exon	15159	15323	.	-	.	ID=Dca52947.1.exon5;Parent=Dca52947.1