Carnation DB

Dca52949.1

Annotation

9-exons
f-1
sp|D7T0N7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_11s0065g00450#GO:0005737;GO:0005634#0F0P2C
Os05t0594800-01 Similar to Adhesion regulating molecule conserved region family protein.
Repeat List (scaffold701)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52949.1	134	308	308	36.68	175	64	4e-54
Target_name	Start	End	Length	Cov(%)
sp\|D7T0N7_VITVI	150	320	320	53.43

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52949.1	115	306	308	35.06	192	55	3e-52
Target_name	Start	End	Length	Cov(%)
Os05t0594800-01	116	305	307	61.88

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold701	Augustus	mRNA	4258	12611	.	+	.	ID=Dca52949.1;Parent=Dca52949
scaffold701	Augustus	exon	4258	4408	.	+	.	ID=Dca52949.1.exon1;Parent=Dca52949.1
scaffold701	Augustus	exon	6712	6800	.	+	.	ID=Dca52949.1.exon2;Parent=Dca52949.1
scaffold701	Augustus	exon	9338	9504	.	+	.	ID=Dca52949.1.exon3;Parent=Dca52949.1
scaffold701	Augus-PASA	exon	10878	10996	.	+	.	ID=Dca52949.1.exon4;Parent=Dca52949.1
scaffold701	Augus-PASA	exon	11202	11234	.	+	.	ID=Dca52949.1.exon5;Parent=Dca52949.1
scaffold701	Augus-PASA	exon	11790	11881	.	+	.	ID=Dca52949.1.exon6;Parent=Dca52949.1
scaffold701	Augus-PASA	exon	11980	12057	.	+	.	ID=Dca52949.1.exon7;Parent=Dca52949.1
scaffold701	Augus-PASA	exon	12167	12221	.	+	.	ID=Dca52949.1.exon8;Parent=Dca52949.1
scaffold701	Augus-PASA	exon	12469	12611	.	+	.	ID=Dca52949.1.exon9;Parent=Dca52949.1