Carnation DB

Dca52970.1

Annotation

8-exons
f-1
sp|D7UBL1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_11s0103g00230#GO:0005634#0F0P1C
AT1G17690.1 | Symbols: NOF1 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Digestive organ expansion factor, predicted (InterPro:IPR010678); Has 25006 Blast hits to 13379 proteins in 904 species: Archae - 102; Bacteria - 5571; Metazoa - 7448; Fungi - 3168; Plants - 1056; Viruses - 466; Other Eukaryotes - 7195 (source: NCBI BLink). | chr1:6082878-6088157 REVERSE LENGTH=754
Repeat List (scaffold7013)

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52970.1	33	233	234	56.83	201	60	1e-70
Target_name	Start	End	Length	Cov(%)
sp\|D7UBL1_VITVI	528	752	753	29.88

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52970.1	33	233	234	52.56	201	55	7e-65
Target_name	Start	End	Length	Cov(%)
AT1G17690.1	528	753	754	29.97

seqname	source	feature	start	end	score	strand	frame	group
scaffold7013	Augustus	mRNA	7937	13492	.	-	.	ID=Dca52970.1;Parent=Dca52970
scaffold7013	Augustus	exon	7937	8011	.	-	.	ID=Dca52970.1.exon1;Parent=Dca52970.1
scaffold7013	Augustus	exon	8196	8267	.	-	.	ID=Dca52970.1.exon2;Parent=Dca52970.1
scaffold7013	Augustus	exon	8413	8475	.	-	.	ID=Dca52970.1.exon3;Parent=Dca52970.1
scaffold7013	Augustus	exon	8559	8664	.	-	.	ID=Dca52970.1.exon4;Parent=Dca52970.1
scaffold7013	Augustus	exon	8776	8870	.	-	.	ID=Dca52970.1.exon5;Parent=Dca52970.1
scaffold7013	Augustus	exon	8976	9005	.	-	.	ID=Dca52970.1.exon6;Parent=Dca52970.1
scaffold7013	Augustus	exon	10272	10331	.	-	.	ID=Dca52970.1.exon7;Parent=Dca52970.1
scaffold7013	Augustus	exon	13289	13492	.	-	.	ID=Dca52970.1.exon8;Parent=Dca52970.1