Dca52988.1
Annotation
- 4-exons
- f-1
- sp|B9ID03_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_575739#unknown#0F0P0C
- sp|Q9FIS0_ARATH#Uncharacterized protein#Arabidopsis thaliana (Mouse-ear cress)#OrderedLocusNames=At5g62170#unknown#0F0P0C
- Repeat List (scaffold702)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca52988.1 |
1 |
681 |
701 |
36.8 |
681 |
33 |
2e-65
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9ID03_POPTR |
1 |
733 |
736 |
99.59 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca52988.1 |
1 |
682 |
701 |
32.81 |
682 |
32 |
2e-61
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G62170.1 |
1 |
656 |
703 |
93.31 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold702 |
Augustus |
mRNA |
30878 |
33476 |
. |
- |
. |
ID=Dca52988.1;Parent=Dca52988 |
| scaffold702 |
Augustus |
exon |
30878 |
31618 |
. |
- |
. |
ID=Dca52988.1.exon1;Parent=Dca52988.1 |
| scaffold702 |
Augustus |
exon |
31878 |
32909 |
. |
- |
. |
ID=Dca52988.1.exon2;Parent=Dca52988.1 |
| scaffold702 |
Augustus |
exon |
33011 |
33069 |
. |
- |
. |
ID=Dca52988.1.exon3;Parent=Dca52988.1 |
| scaffold702 |
Augustus |
exon |
33203 |
33476 |
. |
- |
. |
ID=Dca52988.1.exon4;Parent=Dca52988.1 |
