Dca53008.1
Annotation
- 3-exons
- f-1
- sp|B9N0U7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_836871#GO:0003824#1F0P0C
- AT3G23790.1 | Symbols: AAE16 | AMP-dependent synthetase and ligase family protein | chr3:8575268-8581001 FORWARD LENGTH=722
- Repeat List (scaffold7027)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53008.1 |
12 |
132 |
132 |
52.27 |
121 |
58 |
5e-36
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9N0U7_POPTR |
589 |
706 |
706 |
16.71 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53008.1 |
12 |
132 |
132 |
46.96 |
121 |
51 |
3e-31
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G23790.1 |
604 |
722 |
722 |
16.48 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold7027 |
Augustus |
mRNA |
13884 |
14524 |
. |
- |
. |
ID=Dca53008.1;Parent=Dca53008 |
| scaffold7027 |
Augustus |
exon |
13884 |
13976 |
. |
- |
. |
ID=Dca53008.1.exon1;Parent=Dca53008.1 |
| scaffold7027 |
Augustus |
exon |
14077 |
14134 |
. |
- |
. |
ID=Dca53008.1.exon2;Parent=Dca53008.1 |
| scaffold7027 |
Augustus |
exon |
14277 |
14524 |
. |
- |
. |
ID=Dca53008.1.exon3;Parent=Dca53008.1 |
