Carnation DB

Dca53022.1

Annotation

9-exons
f-1
sp|B9H0T9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1076670#GO:0005524;GO:0008026;GO:0003676#3F0P0C
AT4G15850.1 | Symbols: ATRH1, RH1 | RNA helicase 1 | chr4:9001426-9004534 FORWARD LENGTH=522
Repeat List (scaffold703)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53022.1	1	507	513	65.69	507	67	0
Target_name	Start	End	Length	Cov(%)
sp\|B9H0T9_POPTR	1	507	518	97.87

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53022.1	1	504	513	62.96	504	64	0
Target_name	Start	End	Length	Cov(%)
AT4G15850.1	1	503	522	96.36

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold703	Augustus	mRNA	88640	95578	.	+	.	ID=Dca53022.1;Parent=Dca53022
scaffold703	Augustus	exon	88640	88761	.	+	.	ID=Dca53022.1.exon1;Parent=Dca53022.1
scaffold703	Augustus	exon	88841	89075	.	+	.	ID=Dca53022.1.exon2;Parent=Dca53022.1
scaffold703	Augustus	exon	90094	90348	.	+	.	ID=Dca53022.1.exon3;Parent=Dca53022.1
scaffold703	Augustus	exon	90533	90687	.	+	.	ID=Dca53022.1.exon4;Parent=Dca53022.1
scaffold703	Augustus	exon	92022	92193	.	+	.	ID=Dca53022.1.exon5;Parent=Dca53022.1
scaffold703	Augustus	exon	93216	93403	.	+	.	ID=Dca53022.1.exon6;Parent=Dca53022.1
scaffold703	Augustus	exon	93883	94087	.	+	.	ID=Dca53022.1.exon7;Parent=Dca53022.1
scaffold703	Augustus	exon	94401	94515	.	+	.	ID=Dca53022.1.exon8;Parent=Dca53022.1
scaffold703	Augustus	exon	95484	95578	.	+	.	ID=Dca53022.1.exon9;Parent=Dca53022.1