Dca53030.1
Annotation
- 2-exons
- f-1
- sp|D3IVT9_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold7032)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53030.1 |
14 |
119 |
125 |
37.6 |
106 |
45 |
3e-22
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVT9_9POAL |
1204 |
1309 |
1313 |
8.07 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53030.1 |
39 |
110 |
125 |
20.8 |
72 |
37 |
2e-07
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1313 |
1384 |
1401 |
5.13 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold7032 |
Augustus |
mRNA |
2887 |
4291 |
. |
+ |
. |
ID=Dca53030.1;Parent=Dca53030 |
| scaffold7032 |
Augustus |
exon |
2887 |
2969 |
. |
+ |
. |
ID=Dca53030.1.exon1;Parent=Dca53030.1 |
| scaffold7032 |
Augustus |
exon |
3997 |
4291 |
. |
+ |
. |
ID=Dca53030.1.exon2;Parent=Dca53030.1 |
