Carnation DB

Dca5305.1

Annotation

5-exons
f-1
sp|Q7X7N0_ORYSJ#OSJNBa0035I04.5 protein#Oryza sativa subsp japonica (Rice)#Name=OSJNBa0035I04.5#GO:0003676;GO:0015074#1F1P0C
Repeat List (scaffold1201)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5305.1	13	1215	1301	38.66	1203	41	0
Target_name	Start	End	Length	Cov(%)
sp\|Q7X7N0_ORYSJ	31	1226	1246	95.98

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5305.1	499	1231	1301	20.67	733	36	3e-129
Target_name	Start	End	Length	Cov(%)
Os11t0656500-01	665	1395	1401	52.17

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1201	Augustus	mRNA	69529	78589	.	+	.	ID=Dca5305.1;Parent=Dca5305
scaffold1201	Augustus	exon	69529	70279	.	+	.	ID=Dca5305.1.exon1;Parent=Dca5305.1
scaffold1201	Augustus	exon	70332	70792	.	+	.	ID=Dca5305.1.exon2;Parent=Dca5305.1
scaffold1201	Augustus	exon	70898	71174	.	+	.	ID=Dca5305.1.exon3;Parent=Dca5305.1
scaffold1201	Augustus	exon	71566	73712	.	+	.	ID=Dca5305.1.exon4;Parent=Dca5305.1
scaffold1201	Augustus	exon	78320	78589	.	+	.	ID=Dca5305.1.exon5;Parent=Dca5305.1