Dca5306.1
Annotation
- 2-exons
- f-1
- sp|D3IVU0_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold12011)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5306.1 |
1 |
186 |
186 |
66.12 |
186 |
59 |
8e-67
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVU0_9POAL |
682 |
891 |
896 |
23.43 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5306.1 |
4 |
177 |
186 |
32.79 |
174 |
31 |
3e-20
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1187 |
1382 |
1401 |
13.99 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold12011 |
Augustus |
mRNA |
1 |
633 |
. |
- |
. |
ID=Dca5306.1;Parent=Dca5306 |
| scaffold12011 |
Augustus |
exon |
1 |
304 |
. |
- |
. |
ID=Dca5306.1.exon1;Parent=Dca5306.1 |
| scaffold12011 |
Augustus |
exon |
378 |
633 |
. |
- |
. |
ID=Dca5306.1.exon2;Parent=Dca5306.1 |
