Dca53096.1
Annotation
- 4-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold705)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53096.1 |
1 |
132 |
132 |
74.24 |
132 |
75 |
2e-53
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
610 |
741 |
1501 |
8.79 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53096.1 |
2 |
132 |
132 |
47.72 |
131 |
49 |
1e-32
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
300 |
430 |
707 |
18.52 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold705 |
Augustus |
mRNA |
32873 |
34572 |
. |
+ |
. |
ID=Dca53096.1;Parent=Dca53096 |
| scaffold705 |
Augustus |
exon |
32873 |
33270 |
. |
+ |
. |
ID=Dca53096.1.exon1;Parent=Dca53096.1 |
| scaffold705 |
Augustus |
exon |
33481 |
33861 |
. |
+ |
. |
ID=Dca53096.1.exon2;Parent=Dca53096.1 |
| scaffold705 |
Augustus |
exon |
33955 |
34180 |
. |
+ |
. |
ID=Dca53096.1.exon3;Parent=Dca53096.1 |
| scaffold705 |
Augustus |
exon |
34339 |
34572 |
. |
+ |
. |
ID=Dca53096.1.exon4;Parent=Dca53096.1 |
