Carnation DB

Dca53109.1

Annotation

9-exons
f-1
sp|B9GVI3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_817290#GO:0005507;GO:0016491#2F0P0C
AT4G12420.1 | Symbols: SKU5 | Cupredoxin superfamily protein | chr4:7349941-7352868 REVERSE LENGTH=587
Repeat List (scaffold7050)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53109.1	11	593	598	74.91	583	77	0
Target_name	Start	End	Length	Cov(%)
sp\|B9GVI3_POPTR	8	586	592	97.8

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53109.1	11	588	598	73.07	578	76	0
Target_name	Start	End	Length	Cov(%)
AT4G12420.1	3	572	587	97.1

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold7050	Augus-PASA	mRNA	9653	13196	.	+	.	ID=Dca53109.1;Parent=Dca53109
scaffold7050	Augus-PASA	exon	9653	9808	.	+	.	ID=Dca53109.1.exon1;Parent=Dca53109.1
scaffold7050	Augus-PASA	exon	10372	10481	.	+	.	ID=Dca53109.1.exon2;Parent=Dca53109.1
scaffold7050	Augus-PASA	exon	10879	11149	.	+	.	ID=Dca53109.1.exon3;Parent=Dca53109.1
scaffold7050	Augus-PASA	exon	11371	11509	.	+	.	ID=Dca53109.1.exon4;Parent=Dca53109.1
scaffold7050	Augus-PASA	exon	11655	12021	.	+	.	ID=Dca53109.1.exon5;Parent=Dca53109.1
scaffold7050	Augus-PASA	exon	12183	12548	.	+	.	ID=Dca53109.1.exon6;Parent=Dca53109.1
scaffold7050	Augus-PASA	exon	12637	12715	.	+	.	ID=Dca53109.1.exon7;Parent=Dca53109.1
scaffold7050	Augus-PASA	exon	12800	13017	.	+	.	ID=Dca53109.1.exon8;Parent=Dca53109.1
scaffold7050	Augus-PASA	exon	13106	13196	.	+	.	ID=Dca53109.1.exon9;Parent=Dca53109.1