Carnation DB

Dca53161.1

Annotation

9-exons
f-1
sp|B9GUF0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_798717#GO:0004077;GO:0006464#1F1P0C
AT2G25710.1 | Symbols: HCS1 | holocarboxylase synthase 1 | chr2:10952719-10955061 FORWARD LENGTH=367
Repeat List (scaffold7070)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53161.1	3	326	327	62.38	324	63	4e-123
Target_name	Start	End	Length	Cov(%)
sp\|B9GUF0_POPTR	6	332	333	98.19

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53161.1	1	326	327	59.93	326	60	1e-117
Target_name	Start	End	Length	Cov(%)
AT2G25710.1	39	367	367	89.64

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold7070	Augustus	mRNA	2607	6324	.	+	.	ID=Dca53161.1;Parent=Dca53161
scaffold7070	Augustus	exon	2607	2869	.	+	.	ID=Dca53161.1.exon1;Parent=Dca53161.1
scaffold7070	Augustus	exon	2974	3035	.	+	.	ID=Dca53161.1.exon2;Parent=Dca53161.1
scaffold7070	Augustus	exon	3759	3907	.	+	.	ID=Dca53161.1.exon3;Parent=Dca53161.1
scaffold7070	Augustus	exon	4129	4249	.	+	.	ID=Dca53161.1.exon4;Parent=Dca53161.1
scaffold7070	Augustus	exon	4366	4521	.	+	.	ID=Dca53161.1.exon5;Parent=Dca53161.1
scaffold7070	Augustus	exon	5012	5057	.	+	.	ID=Dca53161.1.exon6;Parent=Dca53161.1
scaffold7070	Augustus	exon	5574	5640	.	+	.	ID=Dca53161.1.exon7;Parent=Dca53161.1
scaffold7070	Augustus	exon	5820	5896	.	+	.	ID=Dca53161.1.exon8;Parent=Dca53161.1
scaffold7070	Augustus	exon	6282	6324	.	+	.	ID=Dca53161.1.exon9;Parent=Dca53161.1