Carnation DB

Dca53182.1

Annotation

6-exons
f-1
sp|F6HH65_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_11s0016g04730#GO:0008270#1F0P0C
Os08t0384900-01 Zinc finger, RING/FYVE/PHD-type domain containing protein.
Repeat List (scaffold708)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53182.1	1	339	339	75.22	339	73	4e-142
Target_name	Start	End	Length	Cov(%)
sp\|F6HH65_VITVI	76	393	393	80.91

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53182.1	14	339	339	67.84	326	70	5e-129
Target_name	Start	End	Length	Cov(%)
Os08t0384900-01	5	314	315	98.41

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold708	Augus-PASA	mRNA	76715	79829	.	-	.	ID=Dca53182.1;Parent=Dca53182
scaffold708	Augus-PASA	exon	76715	76807	.	-	.	ID=Dca53182.1.exon1;Parent=Dca53182.1
scaffold708	Augus-PASA	exon	77320	77606	.	-	.	ID=Dca53182.1.exon2;Parent=Dca53182.1
scaffold708	Augus-PASA	exon	77967	78090	.	-	.	ID=Dca53182.1.exon3;Parent=Dca53182.1
scaffold708	Augus-PASA	exon	78548	78694	.	-	.	ID=Dca53182.1.exon4;Parent=Dca53182.1
scaffold708	Augus-PASA	exon	78807	78892	.	-	.	ID=Dca53182.1.exon5;Parent=Dca53182.1
scaffold708	Augustus	exon	79547	79829	.	-	.	ID=Dca53182.1.exon6;Parent=Dca53182.1