Carnation DB

Dca53183.1

Annotation

7-exons
f-1
sp|C6TKK6_SOYBN#Putative uncharacterized protein#Glycine max (Soybean) (Glycine hispida)#unknown#unknown#0F0P0C
sp|B9STP9_RICCO#Serine-threonine kinase receptor-associated protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0826280#GO:0016301;GO:0004872#2F0P0C
Repeat List (scaffold708)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53183.1	1	345	352	83.23	345	85	2e-176
Target_name	Start	End	Length	Cov(%)
sp\|C6TKK6_SOYBN	1	344	352	97.72

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53183.1	1	345	352	77.84	345	79	3e-165
Target_name	Start	End	Length	Cov(%)
Os06t0598900-01	1	341	343	99.41

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold708	Augus-PASA	mRNA	82989	88460	.	+	.	ID=Dca53183.1;Parent=Dca53183
scaffold708	Augus-PASA	exon	82989	83106	.	+	.	ID=Dca53183.1.exon1;Parent=Dca53183.1
scaffold708	Augus-PASA	exon	84979	85114	.	+	.	ID=Dca53183.1.exon2;Parent=Dca53183.1
scaffold708	Augus-PASA	exon	86691	86772	.	+	.	ID=Dca53183.1.exon3;Parent=Dca53183.1
scaffold708	Augus-PASA	exon	87050	87225	.	+	.	ID=Dca53183.1.exon4;Parent=Dca53183.1
scaffold708	Augus-PASA	exon	87509	87646	.	+	.	ID=Dca53183.1.exon5;Parent=Dca53183.1
scaffold708	Augus-PASA	exon	87731	87870	.	+	.	ID=Dca53183.1.exon6;Parent=Dca53183.1
scaffold708	Augus-PASA	exon	88192	88460	.	+	.	ID=Dca53183.1.exon7;Parent=Dca53183.1