Carnation DB

Dca53265.1

Annotation

5-exons
f-1
sp|F6H052_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_18s0001g12630#GO:0005488#1F0P0C
sp|B9R7W0_RICCO#Pentatricopeptide repeat-containing protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1594730#GO:0005488#1F0P0C
Repeat List (scaffold71)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53265.1	1	694	957	37.82	694	50	0
Target_name	Start	End	Length	Cov(%)
sp\|F6H052_VITVI	1	717	720	99.58

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53265.1	4	685	957	33.75	682	46	3e-160
Target_name	Start	End	Length	Cov(%)
AT1G19520.1	8	708	725	96.68

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold71	Augus-PASA	mRNA	241352	248230	.	+	.	ID=Dca53265.1;Parent=Dca53265
scaffold71	Augus-PASA	exon	241352	242398	.	+	.	ID=Dca53265.1.exon1;Parent=Dca53265.1
scaffold71	Augustus	exon	244580	245606	.	+	.	ID=Dca53265.1.exon2;Parent=Dca53265.1
scaffold71	Augustus	exon	246609	246813	.	+	.	ID=Dca53265.1.exon3;Parent=Dca53265.1
scaffold71	Augustus	exon	246933	247335	.	+	.	ID=Dca53265.1.exon4;Parent=Dca53265.1
scaffold71	Augustus	exon	248039	248230	.	+	.	ID=Dca53265.1.exon5;Parent=Dca53265.1