Carnation DB

Dca53271.1

Annotation

6-exons
f-1
sp|B9SWV9_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_0566120#GO:0005488#1F0P0C
AT1G18260.1 | Symbols: | HCP-like superfamily protein | chr1:6279047-6282008 REVERSE LENGTH=678
Repeat List (scaffold71)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53271.1	12	682	691	72.06	671	74	0
Target_name	Start	End	Length	Cov(%)
sp\|B9SWV9_RICCO	10	673	681	97.5

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53271.1	11	662	691	66.13	652	70	0
Target_name	Start	End	Length	Cov(%)
AT1G18260.1	8	649	678	94.69

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold71	Augus-PASA	mRNA	306101	311814	.	+	.	ID=Dca53271.1;Parent=Dca53271
scaffold71	Augus-PASA	exon	306101	306661	.	+	.	ID=Dca53271.1.exon1;Parent=Dca53271.1
scaffold71	Augustus	exon	307908	308399	.	+	.	ID=Dca53271.1.exon2;Parent=Dca53271.1
scaffold71	Augus-PASA	exon	309237	309452	.	+	.	ID=Dca53271.1.exon3;Parent=Dca53271.1
scaffold71	Augus-PASA	exon	310385	310708	.	+	.	ID=Dca53271.1.exon4;Parent=Dca53271.1
scaffold71	Augus-PASA	exon	310827	311069	.	+	.	ID=Dca53271.1.exon5;Parent=Dca53271.1
scaffold71	Augus-PASA	exon	311575	311814	.	+	.	ID=Dca53271.1.exon6;Parent=Dca53271.1