Carnation DB

Dca53273.1

Annotation

16-exons
f-1
sp|B9HKM9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_832471#GO:0015031#0F1P0C
sp|B9RXZ5_RICCO#Charged multivesicular body protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1305670#GO:0015031#0F1P0C
Repeat List (scaffold71)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53273.1	414	643	643	29.23	230	80	2e-104
Target_name	Start	End	Length	Cov(%)
sp\|B9HKM9_POPTR	1	236	236	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53273.1	414	643	643	28.92	230	79	8e-103
Target_name	Start	End	Length	Cov(%)
AT3G10640.1	1	235	235	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold71	Augus-PASA	mRNA	325992	336048	.	-	.	ID=Dca53273.1;Parent=Dca53273
scaffold71	Augus-PASA	exon	325992	326045	.	-	.	ID=Dca53273.1.exon1;Parent=Dca53273.1
scaffold71	Augus-PASA	exon	326827	326966	.	-	.	ID=Dca53273.1.exon2;Parent=Dca53273.1
scaffold71	Augus-PASA	exon	327091	327202	.	-	.	ID=Dca53273.1.exon3;Parent=Dca53273.1
scaffold71	Augus-PASA	exon	327286	327357	.	-	.	ID=Dca53273.1.exon4;Parent=Dca53273.1
scaffold71	Augus-PASA	exon	328013	328106	.	-	.	ID=Dca53273.1.exon5;Parent=Dca53273.1
scaffold71	Augus-PASA	exon	330902	331053	.	-	.	ID=Dca53273.1.exon6;Parent=Dca53273.1
scaffold71	Augus-PASA	exon	331932	332005	.	-	.	ID=Dca53273.1.exon7;Parent=Dca53273.1
scaffold71	Augustus	exon	332116	332177	.	-	.	ID=Dca53273.1.exon8;Parent=Dca53273.1
scaffold71	Augustus	exon	333642	333775	.	-	.	ID=Dca53273.1.exon9;Parent=Dca53273.1
scaffold71	Augustus	exon	334407	334495	.	-	.	ID=Dca53273.1.exon10;Parent=Dca53273.1
scaffold71	Augustus	exon	334599	334642	.	-	.	ID=Dca53273.1.exon11;Parent=Dca53273.1
scaffold71	Augustus	exon	334754	334851	.	-	.	ID=Dca53273.1.exon12;Parent=Dca53273.1
scaffold71	Augustus	exon	334950	335125	.	-	.	ID=Dca53273.1.exon13;Parent=Dca53273.1
scaffold71	Augustus	exon	335227	335377	.	-	.	ID=Dca53273.1.exon14;Parent=Dca53273.1
scaffold71	Augustus	exon	335478	335556	.	-	.	ID=Dca53273.1.exon15;Parent=Dca53273.1
scaffold71	Augustus	exon	335648	336048	.	-	.	ID=Dca53273.1.exon16;Parent=Dca53273.1