Carnation DB

Dca53391.1

Annotation

17-exons
f-1
sp|F6GU20_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_06s0004g02600#GO:0005634;GO:0005524;GO:0003677;GO:0004386;GO:0008270#4F0P1C
sp|B9I6P2_POPTR#Chromatin remodeling complex subunit#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#Name=CHR945-1#GO:0005634;GO:0005524;GO:0003677;GO:0004386;GO:0008270#4F0P1C
Repeat List (scaffold713)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53391.1	377	1253	1670	24.49	877	41	0
Target_name	Start	End	Length	Cov(%)
sp\|F6GU20_VITVI	119	1106	1120	88.21

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53391.1	342	1272	1670	22.99	931	38	3e-162
Target_name	Start	End	Length	Cov(%)
Os06t0102800-01	272	1270	1274	78.41

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold713	Augustus	mRNA	83513	100205	.	-	.	ID=Dca53391.1;Parent=Dca53391
scaffold713	Augustus	exon	83513	84064	.	-	.	ID=Dca53391.1.exon1;Parent=Dca53391.1
scaffold713	Augustus	exon	84997	85595	.	-	.	ID=Dca53391.1.exon2;Parent=Dca53391.1
scaffold713	Augustus	exon	85691	85892	.	-	.	ID=Dca53391.1.exon3;Parent=Dca53391.1
scaffold713	Augustus	exon	89074	89192	.	-	.	ID=Dca53391.1.exon4;Parent=Dca53391.1
scaffold713	Augustus	exon	89840	90710	.	-	.	ID=Dca53391.1.exon5;Parent=Dca53391.1
scaffold713	Augustus	exon	91256	91432	.	-	.	ID=Dca53391.1.exon6;Parent=Dca53391.1
scaffold713	Augustus	exon	91538	91834	.	-	.	ID=Dca53391.1.exon7;Parent=Dca53391.1
scaffold713	Augustus	exon	91914	92054	.	-	.	ID=Dca53391.1.exon8;Parent=Dca53391.1
scaffold713	Augustus	exon	93029	93283	.	-	.	ID=Dca53391.1.exon9;Parent=Dca53391.1
scaffold713	Augustus	exon	93749	93877	.	-	.	ID=Dca53391.1.exon10;Parent=Dca53391.1
scaffold713	Augustus	exon	95443	95706	.	-	.	ID=Dca53391.1.exon11;Parent=Dca53391.1
scaffold713	Augustus	exon	95855	95979	.	-	.	ID=Dca53391.1.exon12;Parent=Dca53391.1
scaffold713	Augustus	exon	96285	96372	.	-	.	ID=Dca53391.1.exon13;Parent=Dca53391.1
scaffold713	Augustus	exon	97416	97538	.	-	.	ID=Dca53391.1.exon14;Parent=Dca53391.1
scaffold713	Augustus	exon	98541	98631	.	-	.	ID=Dca53391.1.exon15;Parent=Dca53391.1
scaffold713	Augustus	exon	99099	99705	.	-	.	ID=Dca53391.1.exon16;Parent=Dca53391.1
scaffold713	Augustus	exon	99833	100205	.	-	.	ID=Dca53391.1.exon17;Parent=Dca53391.1