Carnation DB

Dca53426.1

Annotation

19-exons
f-1
sp|B9H9F5_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_654065#GO:0019898;GO:0009654;GO:0005509;GO:0015979#1F1P2C
AT5G11450.1 | Symbols: | Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein | chr5:3654475-3656357 FORWARD LENGTH=297
Repeat List (scaffold714)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53426.1	312	491	491	28.51	180	78	7e-79
Target_name	Start	End	Length	Cov(%)
sp\|B9H9F5_POPTR	116	295	295	61.01

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53426.1	297	491	491	28.92	195	73	4e-76
Target_name	Start	End	Length	Cov(%)
AT5G11450.1	111	297	297	62.96

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold714	Augustus	mRNA	84761	93404	.	-	.	ID=Dca53426.1;Parent=Dca53426
scaffold714	Augustus	exon	84761	84859	.	-	.	ID=Dca53426.1.exon1;Parent=Dca53426.1
scaffold714	Augustus	exon	84958	85007	.	-	.	ID=Dca53426.1.exon2;Parent=Dca53426.1
scaffold714	Augustus	exon	85393	85447	.	-	.	ID=Dca53426.1.exon3;Parent=Dca53426.1
scaffold714	Augustus	exon	85538	85597	.	-	.	ID=Dca53426.1.exon4;Parent=Dca53426.1
scaffold714	Augustus	exon	85933	85992	.	-	.	ID=Dca53426.1.exon5;Parent=Dca53426.1
scaffold714	Augustus	exon	86470	86568	.	-	.	ID=Dca53426.1.exon6;Parent=Dca53426.1
scaffold714	Augustus	exon	86873	86940	.	-	.	ID=Dca53426.1.exon7;Parent=Dca53426.1
scaffold714	Augustus	exon	87133	87182	.	-	.	ID=Dca53426.1.exon8;Parent=Dca53426.1
scaffold714	Augustus	exon	88618	88712	.	-	.	ID=Dca53426.1.exon9;Parent=Dca53426.1
scaffold714	Augustus	exon	88811	88860	.	-	.	ID=Dca53426.1.exon10;Parent=Dca53426.1
scaffold714	Augustus	exon	89246	89300	.	-	.	ID=Dca53426.1.exon11;Parent=Dca53426.1
scaffold714	Augustus	exon	89391	89450	.	-	.	ID=Dca53426.1.exon12;Parent=Dca53426.1
scaffold714	Augustus	exon	89786	89845	.	-	.	ID=Dca53426.1.exon13;Parent=Dca53426.1
scaffold714	Augustus	exon	90323	90421	.	-	.	ID=Dca53426.1.exon14;Parent=Dca53426.1
scaffold714	Augustus	exon	90726	90793	.	-	.	ID=Dca53426.1.exon15;Parent=Dca53426.1
scaffold714	Augustus	exon	90986	91035	.	-	.	ID=Dca53426.1.exon16;Parent=Dca53426.1
scaffold714	Augustus	exon	91909	92017	.	-	.	ID=Dca53426.1.exon17;Parent=Dca53426.1
scaffold714	Augustus	exon	92856	93031	.	-	.	ID=Dca53426.1.exon18;Parent=Dca53426.1
scaffold714	Augustus	exon	93292	93404	.	-	.	ID=Dca53426.1.exon19;Parent=Dca53426.1