Carnation DB

Dca53461.1

Annotation

5-exons
f-1
sp|B9N5Y7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1116382#unknown#0F0P0C
Repeat List (scaffold715)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53461.1	27	481	485	42.88	455	43	3e-85
Target_name	Start	End	Length	Cov(%)
sp\|B9N5Y7_POPTR	40	521	523	92.16

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53461.1	50	395	485	35.05	346	43	5e-61
Target_name	Start	End	Length	Cov(%)
AT3G59670.1	40	426	517	74.85

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold715	Augustus	mRNA	53938	58355	.	+	.	ID=Dca53461.1;Parent=Dca53461
scaffold715	Augustus	exon	53938	54293	.	+	.	ID=Dca53461.1.exon1;Parent=Dca53461.1
scaffold715	Augustus	exon	55098	55378	.	+	.	ID=Dca53461.1.exon2;Parent=Dca53461.1
scaffold715	Augustus	exon	55477	55530	.	+	.	ID=Dca53461.1.exon3;Parent=Dca53461.1
scaffold715	Augustus	exon	56841	57292	.	+	.	ID=Dca53461.1.exon4;Parent=Dca53461.1
scaffold715	Augus-PASA	exon	58041	58355	.	+	.	ID=Dca53461.1.exon5;Parent=Dca53461.1