Dca53481.1
Annotation
- 2-exons
- f-1
- sp|Q2AA50_ASPOF#Retrotransposon gag protein#Asparagus officinalis (Garden asparagus)#ORFNames=19.t00014#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold7156)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53481.1 |
131 |
492 |
792 |
16.03 |
362 |
31 |
3e-40
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2AA50_ASPOF |
4 |
415 |
1788 |
23.04 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53481.1 |
568 |
792 |
792 |
9.84 |
225 |
35 |
2e-37
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0202300-03 |
146 |
366 |
591 |
37.39 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold7156 |
Augustus |
mRNA |
24283 |
28227 |
. |
- |
. |
ID=Dca53481.1;Parent=Dca53481 |
| scaffold7156 |
Augustus |
exon |
24283 |
25041 |
. |
- |
. |
ID=Dca53481.1.exon1;Parent=Dca53481.1 |
| scaffold7156 |
Augustus |
exon |
26608 |
28227 |
. |
- |
. |
ID=Dca53481.1.exon2;Parent=Dca53481.1 |
