Carnation DB

Dca53494.1

Annotation

9-exons
f-1
sp|D7U7X0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_15s0048g00380#GO:0005524;GO:0003677;GO:0008094;GO:0006259#3F1P0C
sp|G7JFT5_MEDTR#DNA repair protein RAD51-like protein#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_4g024850#GO:0005524;GO:0003677;GO:0008094;GO:0006259#3F1P0C
Repeat List (scaffold716)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53494.1	1	363	363	65.56	363	66	7e-133
Target_name	Start	End	Length	Cov(%)
sp\|D7U7X0_VITVI	1	346	346	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53494.1	1	363	363	59.77	363	60	3e-121
Target_name	Start	End	Length	Cov(%)
Os01t0578000-01	1	349	350	99.71

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold716	Augus-PASA	mRNA	57755	60889	.	-	.	ID=Dca53494.1;Parent=Dca53494
scaffold716	Augus-PASA	exon	57755	57930	.	-	.	ID=Dca53494.1.exon1;Parent=Dca53494.1
scaffold716	Augus-PASA	exon	58016	58082	.	-	.	ID=Dca53494.1.exon2;Parent=Dca53494.1
scaffold716	Augus-PASA	exon	58253	58384	.	-	.	ID=Dca53494.1.exon3;Parent=Dca53494.1
scaffold716	Augustus	exon	59113	59339	.	-	.	ID=Dca53494.1.exon4;Parent=Dca53494.1
scaffold716	Augustus	exon	59427	59497	.	-	.	ID=Dca53494.1.exon5;Parent=Dca53494.1
scaffold716	Augustus	exon	59574	59607	.	-	.	ID=Dca53494.1.exon6;Parent=Dca53494.1
scaffold716	Augustus	exon	59788	59961	.	-	.	ID=Dca53494.1.exon7;Parent=Dca53494.1
scaffold716	Augustus	exon	60096	60194	.	-	.	ID=Dca53494.1.exon8;Parent=Dca53494.1
scaffold716	Augustus	exon	60778	60889	.	-	.	ID=Dca53494.1.exon9;Parent=Dca53494.1