Carnation DB

Dca53511.1

Annotation

8-exons
f-1
sp|F6HKF1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0007g04400#GO:0005524;GO:0008026;GO:0003676#3F0P0C
sp|D6N3H0_GOSHI#RNA helicase-like protein#Gossypium hirsutum (Upland cotton) (Gossypium mexicanum)#unknown#GO:0005524;GO:0008026;GO:0003676#3F0P0C
Repeat List (scaffold7163)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53511.1	20	476	492	67.27	457	72	0
Target_name	Start	End	Length	Cov(%)
sp\|F6HKF1_VITVI	9	459	513	87.91

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53511.1	6	492	492	64.02	487	64	2e-179
Target_name	Start	End	Length	Cov(%)
AT3G53110.1	22	494	496	95.36

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold7163	Augustus	mRNA	753	6258	.	+	.	ID=Dca53511.1;Parent=Dca53511
scaffold7163	Augustus	exon	753	974	.	+	.	ID=Dca53511.1.exon1;Parent=Dca53511.1
scaffold7163	Augustus	exon	1768	2061	.	+	.	ID=Dca53511.1.exon2;Parent=Dca53511.1
scaffold7163	Augus-PASA	exon	2157	2390	.	+	.	ID=Dca53511.1.exon3;Parent=Dca53511.1
scaffold7163	Augus-PASA	exon	3049	3114	.	+	.	ID=Dca53511.1.exon4;Parent=Dca53511.1
scaffold7163	Augus-PASA	exon	3361	3762	.	+	.	ID=Dca53511.1.exon5;Parent=Dca53511.1
scaffold7163	Augus-PASA	exon	3844	3955	.	+	.	ID=Dca53511.1.exon6;Parent=Dca53511.1
scaffold7163	Augus-PASA	exon	5203	5288	.	+	.	ID=Dca53511.1.exon7;Parent=Dca53511.1
scaffold7163	Augus-PASA	exon	6196	6258	.	+	.	ID=Dca53511.1.exon8;Parent=Dca53511.1