Dca53519.1
Annotation
- 2-exons
- f-2
- sp|O81068_ARATH#Putative non-LTR retroelement reverse transcriptase#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g28980#GO:0003723;GO:0003964;GO:0008270;GO:0006278#3F1P0C
- Repeat List (scaffold7169)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53519.1 |
111 |
342 |
342 |
31.28 |
232 |
47 |
2e-54
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81068_ARATH |
728 |
954 |
1529 |
14.84 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53519.1 |
139 |
342 |
342 |
21.63 |
204 |
37 |
4e-35
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
350 |
553 |
857 |
23.8 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold7169 |
Augustus |
mRNA |
304 |
1578 |
. |
+ |
. |
ID=Dca53519.1;Parent=Dca53519 |
| scaffold7169 |
Augustus |
exon |
304 |
704 |
. |
+ |
. |
ID=Dca53519.1.exon1;Parent=Dca53519.1 |
| scaffold7169 |
Augustus |
exon |
950 |
1578 |
. |
+ |
. |
ID=Dca53519.1.exon2;Parent=Dca53519.1 |
