Dca53547.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold7179)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53547.1 |
1 |
185 |
185 |
62.16 |
185 |
56 |
2e-59
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
1258 |
1465 |
1501 |
13.85 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53547.1 |
14 |
185 |
185 |
43.24 |
172 |
42 |
1e-39
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os03t0627900-01 |
8 |
202 |
230 |
84.78 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold7179 |
Augustus |
mRNA |
35664 |
36293 |
. |
+ |
. |
ID=Dca53547.1;Parent=Dca53547 |
| scaffold7179 |
Augustus |
exon |
35664 |
35820 |
. |
+ |
. |
ID=Dca53547.1.exon1;Parent=Dca53547.1 |
| scaffold7179 |
Augustus |
exon |
35893 |
36293 |
. |
+ |
. |
ID=Dca53547.1.exon2;Parent=Dca53547.1 |
