Dca53563.1
Annotation
- 3-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q9FZN9_ARATH#Retroelement pol polyprotein-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
- Repeat List (scaffold7184)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53563.1 |
214 |
284 |
464 |
9.48 |
71 |
59 |
3e-16
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
521 |
595 |
1717 |
4.36 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53563.1 |
49 |
227 |
464 |
15.51 |
179 |
41 |
5e-35
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0202300-03 |
70 |
248 |
591 |
30.28 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold7184 |
Augustus |
mRNA |
1944 |
4743 |
. |
+ |
. |
ID=Dca53563.1;Parent=Dca53563 |
| scaffold7184 |
Augustus |
exon |
1944 |
2627 |
. |
+ |
. |
ID=Dca53563.1.exon1;Parent=Dca53563.1 |
| scaffold7184 |
Augustus |
exon |
3957 |
4127 |
. |
+ |
. |
ID=Dca53563.1.exon2;Parent=Dca53563.1 |
| scaffold7184 |
Augustus |
exon |
4204 |
4743 |
. |
+ |
. |
ID=Dca53563.1.exon3;Parent=Dca53563.1 |
