Dca53578.1
Annotation
- 2-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q2AA50_ASPOF#Retrotransposon gag protein#Asparagus officinalis (Garden asparagus)#ORFNames=19.t00014#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold7189)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53578.1 |
1 |
616 |
656 |
46.95 |
616 |
50 |
1e-146
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
84 |
653 |
1717 |
33.19 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53578.1 |
426 |
557 |
656 |
6.7 |
132 |
34 |
4e-11
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
63 |
189 |
192 |
66.14 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold7189 |
Augustus |
mRNA |
10019 |
14567 |
. |
- |
. |
ID=Dca53578.1;Parent=Dca53578 |
| scaffold7189 |
Augustus |
exon |
10019 |
10144 |
. |
- |
. |
ID=Dca53578.1.exon1;Parent=Dca53578.1 |
| scaffold7189 |
Augustus |
exon |
12723 |
14567 |
. |
- |
. |
ID=Dca53578.1.exon2;Parent=Dca53578.1 |
