Carnation DB

Dca53695.1

Annotation

7-exons
f-1
sp|D7SUE3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_04s0008g03830#GO:0016021;GO:0004252;GO:0006508#1F1P1C
AT5G25752.1 | Symbols: ATRBL11, RBL11 | rhomboid-like protein 11 | chr5:8951503-8953323 REVERSE LENGTH=280
Repeat List (scaffold7217)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53695.1	18	239	249	72.28	222	82	6e-103
Target_name	Start	End	Length	Cov(%)
sp\|D7SUE3_VITVI	61	281	293	75.42

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53695.1	2	239	249	70.68	238	74	1e-94
Target_name	Start	End	Length	Cov(%)
AT5G25752.1	36	275	280	85.71

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold7217	Augus-PASA	mRNA	19113	22200	.	+	.	ID=Dca53695.1;Parent=Dca53695
scaffold7217	Augus-PASA	exon	19113	19185	.	+	.	ID=Dca53695.1.exon1;Parent=Dca53695.1
scaffold7217	Augus-PASA	exon	20594	20718	.	+	.	ID=Dca53695.1.exon2;Parent=Dca53695.1
scaffold7217	Augus-PASA	exon	20908	20993	.	+	.	ID=Dca53695.1.exon3;Parent=Dca53695.1
scaffold7217	Augus-PASA	exon	21245	21285	.	+	.	ID=Dca53695.1.exon4;Parent=Dca53695.1
scaffold7217	Augus-PASA	exon	21387	21553	.	+	.	ID=Dca53695.1.exon5;Parent=Dca53695.1
scaffold7217	Augus-PASA	exon	21641	21703	.	+	.	ID=Dca53695.1.exon6;Parent=Dca53695.1
scaffold7217	Augus-PASA	exon	22006	22200	.	+	.	ID=Dca53695.1.exon7;Parent=Dca53695.1