Carnation DB

Dca53709.1

Annotation

7-exons
f-1
sp|B9SRY8_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_0517300#GO:0009055;GO:0015035;GO:0045454#2F1P0C
AT5G03880.1 | Symbols: | Thioredoxin family protein | chr5:1038674-1041453 REVERSE LENGTH=339
Repeat List (scaffold722)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53709.1	54	134	135	21.48	81	36	2e-09
Target_name	Start	End	Length	Cov(%)
sp\|B9SRY8_RICCO	138	219	344	23.83

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53709.1	54	134	135	25.92	81	43	1e-13
Target_name	Start	End	Length	Cov(%)
AT5G03880.1	139	220	339	24.18

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold722	Augustus	mRNA	108619	113483	.	-	.	ID=Dca53709.1;Parent=Dca53709
scaffold722	Augustus	exon	108619	108708	.	-	.	ID=Dca53709.1.exon1;Parent=Dca53709.1
scaffold722	Augustus	exon	108792	108849	.	-	.	ID=Dca53709.1.exon2;Parent=Dca53709.1
scaffold722	Augustus	exon	110038	110105	.	-	.	ID=Dca53709.1.exon3;Parent=Dca53709.1
scaffold722	Augustus	exon	110188	110247	.	-	.	ID=Dca53709.1.exon4;Parent=Dca53709.1
scaffold722	Augustus	exon	110357	110398	.	-	.	ID=Dca53709.1.exon5;Parent=Dca53709.1
scaffold722	Augustus	exon	110509	110552	.	-	.	ID=Dca53709.1.exon6;Parent=Dca53709.1
scaffold722	Augustus	exon	113438	113483	.	-	.	ID=Dca53709.1.exon7;Parent=Dca53709.1