Dca5372.1
Annotation
- 2-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Os09t0122300-01 Similar to Zinc knuckle family protein.
- Repeat List (scaffold12045)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5372.1 |
61 |
217 |
621 |
12.23 |
157 |
49 |
7e-39
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
11 |
164 |
1717 |
8.96 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5372.1 |
269 |
396 |
621 |
6.44 |
128 |
32 |
2e-10
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
63 |
189 |
192 |
66.14 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold12045 |
Augustus |
mRNA |
7186 |
10785 |
. |
+ |
. |
ID=Dca5372.1;Parent=Dca5372 |
| scaffold12045 |
Augustus |
exon |
7186 |
7838 |
. |
+ |
. |
ID=Dca5372.1.exon1;Parent=Dca5372.1 |
| scaffold12045 |
Augustus |
exon |
9573 |
10785 |
. |
+ |
. |
ID=Dca5372.1.exon2;Parent=Dca5372.1 |
