Carnation DB

Dca53799.1

Annotation

14-exons
f-1
sp|B9IB28_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_835003#GO:0004185;GO:0006508#1F1P0C
AT4G12910.1 | Symbols: scpl20 | serine carboxypeptidase-like 20 | chr4:7550576-7553051 REVERSE LENGTH=497
Repeat List (scaffold725)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53799.1	12	497	497	75.45	486	77	0
Target_name	Start	End	Length	Cov(%)
sp\|B9IB28_POPTR	7	495	495	98.78

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53799.1	3	497	497	67.2	495	68	0
Target_name	Start	End	Length	Cov(%)
AT4G12910.1	2	497	497	99.79

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold725	Augus-PASA	mRNA	77339	80796	.	-	.	ID=Dca53799.1;Parent=Dca53799
scaffold725	Augus-PASA	exon	77339	77422	.	-	.	ID=Dca53799.1.exon1;Parent=Dca53799.1
scaffold725	Augus-PASA	exon	77683	77728	.	-	.	ID=Dca53799.1.exon2;Parent=Dca53799.1
scaffold725	Augus-PASA	exon	77824	77937	.	-	.	ID=Dca53799.1.exon3;Parent=Dca53799.1
scaffold725	Augus-PASA	exon	78244	78365	.	-	.	ID=Dca53799.1.exon4;Parent=Dca53799.1
scaffold725	Augus-PASA	exon	78462	78527	.	-	.	ID=Dca53799.1.exon5;Parent=Dca53799.1
scaffold725	Augus-PASA	exon	78751	78993	.	-	.	ID=Dca53799.1.exon6;Parent=Dca53799.1
scaffold725	Augus-PASA	exon	79089	79169	.	-	.	ID=Dca53799.1.exon7;Parent=Dca53799.1
scaffold725	Augus-PASA	exon	79257	79358	.	-	.	ID=Dca53799.1.exon8;Parent=Dca53799.1
scaffold725	Augus-PASA	exon	79431	79468	.	-	.	ID=Dca53799.1.exon9;Parent=Dca53799.1
scaffold725	Augus-PASA	exon	79542	79644	.	-	.	ID=Dca53799.1.exon10;Parent=Dca53799.1
scaffold725	Augus-PASA	exon	79741	79863	.	-	.	ID=Dca53799.1.exon11;Parent=Dca53799.1
scaffold725	Augus-PASA	exon	79970	80046	.	-	.	ID=Dca53799.1.exon12;Parent=Dca53799.1
scaffold725	Augus-PASA	exon	80160	80305	.	-	.	ID=Dca53799.1.exon13;Parent=Dca53799.1
scaffold725	Augus-PASA	exon	80648	80796	.	-	.	ID=Dca53799.1.exon14;Parent=Dca53799.1
scaffold725	Augus-PASA	mRNA	77339	80796	.	-	.	ID=Dca53799.2;Parent=Dca53799
scaffold725	Augus-PASA	exon	77339	77422	.	-	.	ID=Dca53799.2.exon1;Parent=Dca53799.2
scaffold725	Augus-PASA	exon	77683	77728	.	-	.	ID=Dca53799.2.exon2;Parent=Dca53799.2
scaffold725	Augus-PASA	exon	77824	77937	.	-	.	ID=Dca53799.2.exon3;Parent=Dca53799.2
scaffold725	Augus-PASA	exon	78244	78365	.	-	.	ID=Dca53799.2.exon4;Parent=Dca53799.2
scaffold725	Augus-PASA	exon	78462	78527	.	-	.	ID=Dca53799.2.exon5;Parent=Dca53799.2
scaffold725	Augus-PASA	exon	78751	78993	.	-	.	ID=Dca53799.2.exon6;Parent=Dca53799.2
scaffold725	Augus-PASA	exon	79089	79169	.	-	.	ID=Dca53799.2.exon7;Parent=Dca53799.2
scaffold725	Augus-PASA	exon	79431	79468	.	-	.	ID=Dca53799.2.exon8;Parent=Dca53799.2
scaffold725	Augus-PASA	exon	79542	79644	.	-	.	ID=Dca53799.2.exon9;Parent=Dca53799.2
scaffold725	Augus-PASA	exon	79741	79863	.	-	.	ID=Dca53799.2.exon10;Parent=Dca53799.2
scaffold725	Augus-PASA	exon	79970	80046	.	-	.	ID=Dca53799.2.exon11;Parent=Dca53799.2
scaffold725	Augus-PASA	exon	80160	80305	.	-	.	ID=Dca53799.2.exon12;Parent=Dca53799.2
scaffold725	Augus-PASA	exon	80648	80796	.	-	.	ID=Dca53799.2.exon13;Parent=Dca53799.2