Carnation DB

Dca53805.1

Annotation

7-exons
f-1
sp|B9GY13_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_830715#GO:0003677;GO:0008270#2F0P0C
AT1G30970.1 | Symbols: SUF4 | zinc finger (C2H2 type) family protein | chr1:11040613-11043593 REVERSE LENGTH=367
Repeat List (scaffold7250)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53805.1	1	365	365	67.39	365	63	7e-118
Target_name	Start	End	Length	Cov(%)
sp\|B9GY13_POPTR	1	385	385	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53805.1	1	365	365	65.75	365	62	9e-110
Target_name	Start	End	Length	Cov(%)
AT1G30970.1	1	367	367	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold7250	Augus-PASA	mRNA	9332	14131	.	-	.	ID=Dca53805.1;Parent=Dca53805
scaffold7250	Augus-PASA	exon	9332	9403	.	-	.	ID=Dca53805.1.exon1;Parent=Dca53805.1
scaffold7250	Augus-PASA	exon	10049	10102	.	-	.	ID=Dca53805.1.exon2;Parent=Dca53805.1
scaffold7250	Augus-PASA	exon	10782	10936	.	-	.	ID=Dca53805.1.exon3;Parent=Dca53805.1
scaffold7250	Augus-PASA	exon	11342	11742	.	-	.	ID=Dca53805.1.exon4;Parent=Dca53805.1
scaffold7250	Augus-PASA	exon	11841	11964	.	-	.	ID=Dca53805.1.exon5;Parent=Dca53805.1
scaffold7250	Augus-PASA	exon	13714	13811	.	-	.	ID=Dca53805.1.exon6;Parent=Dca53805.1
scaffold7250	Augus-PASA	exon	13938	14131	.	-	.	ID=Dca53805.1.exon7;Parent=Dca53805.1