Carnation DB

Dca53850.1

Annotation

5-exons
f-1
sp|A5ALS5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_028712#GO:0003676#1F0P0C
sp|B9RAH0_RICCO#DNA binding protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1506500#GO:0003676#1F0P0C
Repeat List (scaffold7267)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53850.1	28	157	162	53.08	130	58	1e-38
Target_name	Start	End	Length	Cov(%)
sp\|A5ALS5_VITVI	18	166	217	68.66

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53850.1	28	155	162	50	128	54	3e-32
Target_name	Start	End	Length	Cov(%)
AT5G63460.4	16	163	174	85.05

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold7267	Augustus	mRNA	8864	13853	.	+	.	ID=Dca53850.1;Parent=Dca53850
scaffold7267	Augustus	exon	8864	9013	.	+	.	ID=Dca53850.1.exon1;Parent=Dca53850.1
scaffold7267	Augustus	exon	11679	11724	.	+	.	ID=Dca53850.1.exon2;Parent=Dca53850.1
scaffold7267	Augustus	exon	12230	12323	.	+	.	ID=Dca53850.1.exon3;Parent=Dca53850.1
scaffold7267	Augustus	exon	12714	12790	.	+	.	ID=Dca53850.1.exon4;Parent=Dca53850.1
scaffold7267	Augustus	exon	13732	13853	.	+	.	ID=Dca53850.1.exon5;Parent=Dca53850.1