Carnation DB

Dca53860.1

Annotation

8-exons
f-1
sp|F6GU47_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_06s0004g02080#GO:0005737;GO:0016783;GO:0008033#1F1P1C
sp|B9RIE1_RICCO#tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1578370#GO:0005737;GO:0016783;GO:0004808#2F0P1C
Repeat List (scaffold727)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53860.1	2	357	404	70.04	356	70	2e-162
Target_name	Start	End	Length	Cov(%)
sp\|F6GU47_VITVI	71	479	540	75.74

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53860.1	1	356	404	67.32	356	67	3e-154
Target_name	Start	End	Length	Cov(%)
AT1G51310.1	68	472	497	81.48

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold727	Augustus	mRNA	101904	106441	.	+	.	ID=Dca53860.1;Parent=Dca53860
scaffold727	Augustus	exon	101904	102056	.	+	.	ID=Dca53860.1.exon1;Parent=Dca53860.1
scaffold727	Augustus	exon	103000	103074	.	+	.	ID=Dca53860.1.exon2;Parent=Dca53860.1
scaffold727	Augustus	exon	103460	103517	.	+	.	ID=Dca53860.1.exon3;Parent=Dca53860.1
scaffold727	Augustus	exon	103676	103803	.	+	.	ID=Dca53860.1.exon4;Parent=Dca53860.1
scaffold727	Augustus	exon	104636	104719	.	+	.	ID=Dca53860.1.exon5;Parent=Dca53860.1
scaffold727	Augustus	exon	105201	105352	.	+	.	ID=Dca53860.1.exon6;Parent=Dca53860.1
scaffold727	Augustus	exon	105579	105729	.	+	.	ID=Dca53860.1.exon7;Parent=Dca53860.1
scaffold727	Augustus	exon	106028	106441	.	+	.	ID=Dca53860.1.exon8;Parent=Dca53860.1